| Date | Author/Title | | Document Type |
|---|
| 2025 | Erdős, Péter and Miklós, István and Soukup, Lajos
Fully graphic degree sequences and P-stable degree sequences |  | Article |
| 2024 | Erdős, Péter and Mezei, Tamás Róbert and Miklós, István
Approximate Sampling and Counting of Graphs with Near-P-stable Degree Intervals | | Article |
| 2024 | Hubai, A and Mezei, Tamás Róbert and Béres, Ferenc and Benczúr, András, ifj and Miklós, István
Constructing and sampling partite, 3-uniform hypergraphs with given degree sequence | | Article |
| 2023 | Cibej, U. and Li, Aaron and Miklós, István and Nasir, S. and Srikanth, V.
Constructing bounded degree graphs with prescribed degree and neighbor degree sequences | | Article |
| 2023 | Hong, L and Miklós, István
A Markov chain on the solution space of edge colorings of bipartite graphs | | Article |
| 2022 | Ecker, András and Bagi, Bence and Vértes, Eszter and Steinbach-Németh, Orsolya and Karlócai, Rita and Miklós, István and Hájos, Norbert and Freund, Tamás and Gulyás, Attila and Káli, Szabolcs
Hippocampal sharp wave-ripples and the associated sequence replay emerge from structured synaptic interactions in a network model of area CA3 | | Article |
| 2021 | Miklós, István and Schlafly, G. and Wang, Y. and Wei, Z
Edge Disjoint Caterpillar Realizations | | Article |
| 2021 | Erdős, Péter and Győri, Ervin and Mezei, Tamás Róbert and Miklós, István and Soltész, Dániel
Half-graphs, other non-stable degree sequences, and the switch Markov chain | | Article |
| 2021 | Lőrincz, Orsolya and Tóth, J and Molnár, L and Miklós, István and Pántya, K
In Silico Model Estimates the Clinical Trial Outcome of Cancer Vaccines | | Article |
| 2020 | Gollakota, A and Hardt, W and Miklós, István
Packing Tree Degree Sequences | | Article |
| 2015 | Herman, Joseph L and Novák, Ádám and Lyngso, Rune and Szabó, Adrienn and Miklós, István and Hein, Jotun
Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs | | Article |
| 2015 | Herman, Joseph L and Novák, Ádám and Lyngsø, Rune and Szabó, Adrienn and Miklós, István
Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs | | Article |
| 2015 | Bassler, K.E. and Del Genio, C.I. and Erdős, Péter and Miklós, István and Toroczkai, Z.
Exact sampling of graphs with prescribed degree correlations | | Article |
| 2015 | Miklós, István and Heather, Smith
Sampling and counting genome rearrangement scenarios | | Article |
| 2015 | Erdős, Péter and Miklós, István and Toroczkai, Z.
A decomposition based proof for fast mixing of a Markov chain over balanced realizations of a joint degree matrix | | Article |
| 2014 | Miklós, István and Kiss, Sándor and Tannier, Eric
Counting and sampling SCJ small parsimony solutions | | Article |
| 2013 | Miklós, István and Erdős, Péter and Soukup, Lajos
Towards random uniform sampling of bipartite graphs with given degree sequence | | Article |
| 2012 | Miklós, István and Tannier, E
Approximating the number of Double Cut-and-Join scenarios | | ISI Article |
| 2010 | Miklós, István and Tannier, E.
Bayesian sampling of genomic rearrangement scenarios via double cut and join | | ISI Article |
| 2010 | Miklós, István
Introduction to Algorithms in Bioinformatics | | Book |
| 2010 | Miklós, István and Ciccarelli, Francesca D.
Journal of Computational Biology | | Book (edited) |
| 2010 | Friedman, Anna Eszter and Miklós, István and Hein, J.
MCMC network: graphical interface for Bayesian analysis of metabolic networks | | Article |
| 2010 | Miklós, István and Mélykúti, B. and Swenson, K.
The Metropolized Partial Importance Sampling MCMC mixes slowly on minimum reversal rearrangement paths | | Article |
| 2010 | Miklós, István
RNA Structure Prediction | | Book Section |
| 2010 | Szabó, Adrienn and Novák, Á. and Miklós, István and Hein, J.
Reticular alignment: a progressive corner-cutting method for multiple sequence alignment | | ISI Article |
| 2010 | Erdős, P. and Miklós, István and Toroczkai, Z.
A simple Havel-Hakimi type algorithm to realize graphical degree sequences of directed graphs | | Article |
| 2009 | Satija, R. and Novák, Á. and Miklós, István and Lyngsoe, R. and Hein, J.
BigFoot: Bayesian Alignment and Phylogenetic Footprinting with MCMC BMC | | Article |
| 2009 | Kim, P. and Toroczkai, Z. and Erdős, P. and Miklós, István and Székely, L.
Degree-based graph construction | | Article |
| 2009 | Miklós, István and Darling, A. E.
Efficient sampling of parsimonious inversion histories with application to genome rearrangement in Yersinia | | Article |
| 2009 | Miklós, István and Novák, Á. and Satija, R. and Lyngsoe, R. and Hein, J.
Stochastic models of sequence evolution including insertion-deletion events | | ISI Article |
| 2009 | Csürös, M. and Miklós, István
Streamlining and large ancestral genomes in Archaea inferred with a phylogenetic birth-and-death model | | Other |
| 2008 | Darling, A. E. and Miklós, István and Ragan, M. A.
Dynamics of genome rearrangement in bacterial populations | | ISI Article |
| 2008 | Miklós, István and Novák, Ádám and Dombai, Balázs and Hein, Jotun
How reliably can we predict the reliability of protein structure predictions? | | ISI Article |
| 2008 | Meyer, I. M. and Miklós, István
SimulFold: simultaneously inferring RNA structures including pseudoknots, alignments, and trees using a Bayesian MCMC framework | | ISI Article |
| 2008 | Novák, Ádám and Miklós, István and Lyngso, Rune and Hein, Jotun
StatAlign: an extendable software package for joint Bayesian estimation of alignments and evolutionary trees | | ISI Article |
| 2008 | Miklós, István
Statistical multiple alignment | | Book Section |
| 2008 | Miklós, István and Novák, Á. and Satija, R. and Lyngsoe, R. and Hein, J.
Stochastic Models of Sequence Evolution including Insertion-Deletion events Statistical Methods in Medical Research | | Other |
| 2007 | Miklós, István
Algorithms of Bioinformatics | | Book Section |
| 2007 | Miklós, István
Bioinformatics | | Book Section |
